PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi07g14850.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 188aa    MW: 21426 Da    PI: 9.3205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi07g14850.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-091767655
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     + +Er+RR +++   ++L +++P+   k+++  ls  + L +A  YIk+L+
  Vradi07g14850.1 17 KTIERNRRIHMKALCFKLVSIIPSkYLKPTKDMLSQQDQLDLAATYIKHLR 67
                     689*********************554666666****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.2481166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.28E-51171No hitNo description
Gene3DG3DSA:4.10.280.101.6E-91582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-91581IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-61766IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MKNTNTTVTA SSKLDRKTIE RNRRIHMKAL CFKLVSIIPS KYLKPTKDML SQQDQLDLAA  60
TYIKHLRERI EKLKGEKEQA MKIMRPTQTN NNGIFNIDSE LPLLEIKELG SGIEVMLISG  120
VNKNFMLYEV ISVLEEEGVE VVAANFSTVD DKIFYTVHAQ VKISRVGVEP TRVYQKLQEL  180
ITPLESW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0959830.0BT095983.1 Soybean clone JCVI-FLGm-15G16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014508338.11e-137PREDICTED: transcription factor bHLH36-like
TrEMBLA0A0L9TQF41e-118A0A0L9TQF4_PHAAN; Uncharacterized protein
STRINGGLYMA05G02110.21e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-18bHLH family protein